Research Catalog

Functional genomics : methods and protocols

Title
Functional genomics : methods and protocols / edited by Michael J. Brownstein and Arkady B. Khodursky.
Publication
Totowa, N.J. : Humana Press, [2003], ©2003.

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Details

Additional Authors
  • Brownstein, Michael J.
  • Khodursky, Arkady B.
Description
xii, 258 pages : illustrations (some color); 24 cm.
Series Statement
Methods in molecular biology ; 224
Uniform Title
Methods in molecular biology (Clifton, N.J.) ; v. 224.
Subject
  • DNA microarrays > Laboratory manuals
  • Genomics > Laboratory manuals
  • Proteomics > Laboratory manuals
  • Oligonucleotide Array Sequence Analysis > Methods > Laboratory manuals
Bibliography (note)
  • Includes bibliographical references and index.
Contents
  • 1. Fabrication of cDNA Microarrays / Charlie C. Xiang and Michael J. Brownstein -- 2. Nylon cDNA Expression Arrays / George Jokhadze, Stephen Chen, Claire Granger and Alex Chenchik -- 3. Plastic Microarrays: A Novel Array Support Combining the Benefits of Macro- and Microarrays / Alexander Munishkin, Konrad Faulstich, Vissarion Aivazachvili, Claire Granger and Alex Chenchik -- 4. Preparing Fluorescent Probes for Microarray Studies / Charlie C. Xiang and Michael J. Brownstein -- 5. Escherichia coli Spotted Double-Strand DNA Microarrays: RNA Extraction, Labeling, Hybridization, Quality Control, and Data Management / Arkady B. Khodursky, Jonathan A. Bernstein, Brian J. Peter, Virgil Rhodius, Volker F. Wendisch and Daniel P. Zimmer -- 6. Isolation of Polysomal RNA for Microarray Analysis / Yoav Arava -- 7. Parallel Analysis of Gene Copy Number and Expression Using cDNA Microarrays / Jonathan R. Pollack --
  • 8. Genome-wide Mapping of Protein-DNA Interactions by Chromatin Immunoprecipitation and DNA Microarray Hybridization / Jason D. Lieb -- 9. Statistical Issues in cDNA Microarray Data Analysis / Gordon K. Smyth, Yee Hwa Yang and Terry Speed -- 10. Experimental Design to Make the Most of Microarray Studies / M. Kathleen Kerr -- 11. Statistical Methods for Identifying Differentially Expressed Genes in DNA Microarrays / John D. Storey and Robert Tibshirani -- 12. Detecting Stable Clusters Using Principal Component Analysis / Asa Ben-Hur and Isabelle Guyon -- 13. Clustering in Life Sciences / Ying Zhao and George Karypis -- 14. A Primer on the Visualization of Microarray Data / Paul Fawcett -- 15. Microarray Databases: Storage and Retrieval of Microarray Data / Gavin Sherlock and Catherine A. Ball.
ISBN
1588292916 (alk. paper)
LCCN
2003040707
OCLC
  • ocm51316953
  • SCSB-4346812
Owning Institutions
Columbia University Libraries