Research Catalog

Title

Computational and statistical approaches to genomics / edited by Wei Zhang and Ilya Shmulevich.

Publication

New York : Springer, [2006], ©2006.

Items in the Library & Off-site

Holdings

Details

Additional Authors

• Zhang, Wei, 1963 October 9-
• Shmulevich, Ilya, 1969-

Description

viii, 416 pages, 10 unnumbered pages of plates : illustrations (some color); 25 cm

Subjects

• Genomics > statistics & numerical data
• Genomics > Statistical methods
• Genomics > Data processing
• Models, Genetic
• Oligonucleotide Array Sequence Analysis
• Genomics > Mathematical models
• Electronic Data Processing
• DNA microarrays

Bibliography (note)

• Includes bibliographical references and index.

Contents

1. Microarray image analysis and gene expression ratio statistics / Yidong Chen, Edward R. Dougherty, Michael L. Bittner, Paul Meltzer and Jeffery Trent -- 2. Statistical considerations in the assessment of cDNA microarray data obtained using amplification / Jing Wang, Kevin R. Coombes, Keith Baggerly, Limei Hu, Stanley R. Hamilton and Wei Zhang -- 3. Sources of variation in microarray experiments / Kathleen F. Kerr, Edward H. Leiter, Laurent Picard and Gary A. Churchill -- 4. Studentizing microarray data / Keith A. Baggerly, Kevin R. Coombes, Kenneth R. Hess, David N. Stivers, Lynne V. Abruzzo and Wei Zhang -- 5. Exploratory clustering of gene expression profiles of mutated yeast strains / Merja Oja, Janne Nikkila, Petri Toronen, Garry Wong, Eero Castren and Samuel Kaski -- 6. Selecting informative genes for cancer classification using gene expression data / Tatsuya Akutsu and Satoru Miyano -- 7. Finding functional structures in Glioma gene-expressions using gene shaving clustering and MDL principle / Ciprian D. Giurcaneanu, Cristian Mircean, Gregory N. Fuller and Ioan Tabus -- 8. Design issues and comparison of methods for microarray-based classification / Edward R. Dougherty and Sanju N. Attoor -- 9. Analyzing protein sequences using signal analysis techniques / Karen M. Bloch and Gonzalo R. Arce -- 10. Scale-dependent statistics of the numbers of transcripts and protein sequences encoded in the genome / Vladimir A. Kuznetsov -- 11. Statistical methods in serial analysis of gene expression (SAGE) / Ricardo Z. N. Vencio and Helena Brentani -- 12. Normalized maximum likelihood models for boolean regression with application to prediction and classification in genomics / Ioan Tabus, Jorma Rissanen and Jaakko Astola -- 13. Inference of genetic regulatory networks via best-fit extensions / Harri Lahdesmaki, Ilya Shmulevich, Olli Yli-Harja and Jaakko Astola -- 14. Regularization and noise injection for improving genetic network models / Eugene van Someren, Lodewyk Wessels, Marcel Reinders and Eric Backer -- 15. Parallel computation and visualization tools for codetermination analysis of multivariate gene expression relations / Edward B. Suh, Edward R. Dougherty, Seungchan Kim, Michael L. Bittner, Yidong Chen, Daniel E. Russ and Robert L. Martino -- 16. Single nucleotide polymorphisms and their applications / Rudy Guerra and Zhaoxia Yu -- 17. The contribution of alternative transcription and alternative splicing to the complexity of mammalian transcriptomes / Mihaela Zavolan and Christian Schonbach -- 18. Computational imaging, and statistical analysis of tissue microarrays : quantitative automated analysis of tissue microarrays / Aaron J. Berger, Robert L. Camp and David L. Rimm.

ISBN

• 0387262873 (alk. paper)
• 0387262881 (e-book)

LCCN

• 2005049761
• 9780387262871
• 9780387262888

OCLC

• ocm60414036
• SCSB-5252814

Owning Institutions

Columbia University Libraries