Research Catalog

The phylogenetic handbook : a practical approach to DNA and protein phylogeny

Title
The phylogenetic handbook : a practical approach to DNA and protein phylogeny / edited by Marco Salemi and Anne-Mieke Vandamme.
Publication
Cambridge, UK ; New York : Cambridge University Press, 2003.

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StatusFormatAccessCall NumberItem Location
TextUse in library QP624 .P485 2003Off-site

Details

Additional Authors
  • Salemi, Marco, 1968-
  • Vandamme, Anne-Mieke, 1960-
Description
xxiv, 406 pages : illustrations (some color); 26 cm
Summary
A broad introduction to the theory and practice of nucleotide and amino acid phylogenetic analysis. As a unique feature of this book, each chapter contains an extensive practical section, in which step-by-step exercises on real data sets introduce the reader to the most widely-used phylogeny software.
Subject
  • DNA > Analysis > Handbooks, manuals, etc
  • Proteins > Analysis > Handbooks, manuals, etc
  • Cladistic analysis > Handbooks, manuals, etc
  • Phylogeny
  • Sequence Analysis, DNA > methods
  • Sequence Analysis, Protein > methods
  • Phylogeny
  • Cladistic analysis
  • DNA > Analysis
  • Proteins > Analysis
  • DNS
  • Phylogenetische Systematik
  • Proteine
  • Sequenzanalyse Chemie
  • Aminosäurensequenz
  • Datenanalyse
  • Methode
  • DNS-Sequenz
  • Filogenia
Genre/Form
Handbooks and manuals
Bibliography (note)
  • Includes bibliographical references and index.
Contents
Basic concepts of molecular evolution / Anne-Mieke Vandamme -- Sequence databases / Guy Bottu and Marc Van Ranst -- Multiple alignment / Des Higgins -- Nucleotide substitution models / Korbinian Strimmer, Arndt von Heseler and Marco Salemi -- Phylogeny inference based on distance models / Yves Van de Peer and Marco Salemi -- Phylogeny inference based on parsimony and maximum likelihood methods with PAUP* / Marco Salemi and Jack Sullivan -- Quartet puzzling likelihood methods / Korbinian Strimmer and Arndt von Haeseler -- Phylogenetic analysis using protein sequences / Fred Opperdoes -- Analysis of nucleotide sequences using TreeCon / Yves Van de Peer -- Selecting models of evolution / David Posada -- Analysis of coding sequences / Yoshiyuki Suzuki and Takashi Gojobori -- Splits Tree: a network based tool for exploring evolutionary relationships in molecular data / Vincent Moulton -- Data exploration and tetrapod phylogeny / Xuhua Xia and Zheng Xie -- Detecting recombination in viral sequences / Mika Salminen -- LAMARC: estimating population genetic parameters from molecular data / Mary K. Kuhner.
ISBN
  • 052180390X
  • 9780521803908
LCCN
2002073927
OCLC
  • ocm50155249
  • 50155249
  • SCSB-14408635
Owning Institutions
Princeton University Library